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People participating in Systems Biology initiative

 
 

  Dept. Biochemistry & Biophysics   Henrik Dohlman

Our primary focus is the regulation of G proteins and downstream MAP kinases. G protein-coupled receptors detect neurotransmitters, hormones, odors, taste and light. Genetic defects in G protein signaling pathways can cause a variety of developmental and metabolic disorders, including cancer, obesity, narcolepsy, drug addiction, and resistance to HIV infection.
 

 

    Nikolay Dokholyan Dept. Biochemistry & Biophysics

We study the physical nature of interactions between atoms, molecules, cells, and organisms. The underlying question throughout our research is how these interactions shape the complex organization, behavior, and evolution of biomolecules and organisms.

  Dept. Pharmacology    Timothy C. Elston

The Elston lab is interested in understanding the dynamics of complex biological systems, and developing reliable mathematical models that capture the essential components of these systems. The projects in the lab encompass a wide variety of biological phenomena including MAPK activation in the pheromone response pathway of yeast, noise in gene regulatory networks, airway surface volume regulation, diffusion in viscoelastic fluids, glycine metabolism, and the motor protein dynein.

    Morgan Giddings Dept. of Microbiology & Immunology and Biomedical Engineering

The Giddings lab focuses on an integrated, cross-disciplinary approach to studying both microbial and eukaryotic systems (some might even call it Systems Biology). We start from a strong basis in bioinformatics, combining that with lab work in proteomics, metabolomics, and related areas to study and model cellular systems.

  Joint Department of Biomedical Engineering at UNC-Chapel Hill and NC State University,   Shawn Gomez

Our research is focused on the study of biological processes from an integrated or systems viewpoint, commonly referred to as Systems Biology. Currently, we are especially interested in better understanding the "wiring" of biological systems and the discovery of underlying principles in biological organization. For example, at the molecular level how are interactions created and maintained between proteins? How does the topology of an interaction network affect its dynamics and stability?

    Ken Jacobson  Dept. Cell & Developmental Biology

Together with Professors Gabriel Weinreb and Tim Elston, our laboratory has embarked on an effort in systems biology. Biological processes that occur at the cellular level and consist of large numbers of interacting elements are highly nonlinear and generally involve multiple time and spatial scales.  The quantitative description of these complex systems is of great importance but presents large challenges. 

  Dept. Chemistry,   Garegin A. Papoian

Using tools from diverse areas of physics and bioinformatics we are building nonequilibrium statistical mechanics of signal transduction networks. In particular, we are interested in spatio-temporal regulation of eukaryotic cell motility.

    Leslie Parise  Dept. Biochemistry & Biophysics

The lab is currently mapping signal transduction pathways that lead to the activation of 2 different integrins, aIIbß3 and a2ß1. The lab is studying the structure and function of the integrin cytoplasmic domain binding proteins (e.g. CIB1) as well as small G-proteins (R-Ras and Rap1) to understand how these proteins relay information to these integrins to regulate their activation state.

   Dept. Chemistry,    Michael Rubinstein

The research of our group is in the field of polymer theory and computer simulations. The unique properties of polymeric systems are due to the size, topology and interactions of the molecules they are made of. Our goal is to understand the properties of various polymeric systems and to design new systems with even more interesting and useful properties.

    Richard Superfine  Department of Physics and Astronomy

Dr. Superfine studies the nanoscale properties of molecules, nanotubes, molecular motors, DNA, viruses and cells. He develops and applies new techniques for these studies using optical, scanning probe, electron and magnetic force microscopes. Current experiments probe the ultimate scales for machinery and devices in nanotechnology, including atomic scale gears and devices powered with biological molecular motors.

   Dept. Physics & Astronomy   Paul Tiesinga

The primary objective of the Computational Neurophysics Laboratory is to understand how the brain processes sensory information. The key question is how the cacophony of neural activity leads to day to day behavior. We approach this problem using information-theoretical analysis of experimental data and biophysical model simulations.

Gabriel Weinreb Dept. Cell & Developmental Biology

 Along with data quantification and application of traditional mathematical methods such as chemical kinetics and mechanical dynamics, we work on a graphical systems biology approach, the causal mapping (CMAP), to analyze biological systems. CMAP is a course-grained biological network tool that permits description of causal interactions between the elements of the network and overall system dynamics.