Daniel D. Brown, Ph.D.
Previous Graduate Student

Program in Molecular, Cell, and Developmental Biology, Department of Biology

 

Currently a Post-Doctoral Fellow at the National Institute of Environmental Health Science (NIEHS) in the laboratory of Dr. Perry Blacshear.

 

 
   

 


Daniel's CurriculumVitae

Project Summary

I have spent the 5 years working in Dr. Frank Conlon's lab at UNC-CH. Our lab is interested in understanding the molecular mechanisms of early heart specification and development. Understanding the mechanisms by which heart development occurs is an immensely important pursuit for modern developmental biology and medicine, especially when one considers that about one out of every hundred live births exhibit congenital heart defects. My initial rotation project was to clone a novel gene, Tbx20, from the African Clawed Frog (Xenopus laevis). Tbx20 is a transcription factor that is likely involved in controlling cardiac development. After cloning Tbx20 I first had to characterize its expression pattern in the early frog embryo. By using whole-mount in situ hybridization techniques (which serve to stain an embryo blue wherever the gene being studied is turned on) I showed that Tbx20 is expressed throughout all of the heart-forming regions over the entire course of heart development.

Tbx20 Expression in Xenopus laevis

Click on image for larger version

Anterior view of a stage 16 embryo. Dorsal side is facing up.

Expression in heart primordia and cement gland

Ventral view of the anterior portion of a stage 27 embryo.

Expression in heart primordia and cement gland

Lateral view of the anterior portion of a stage 35 embryo.

Expression in heart , hindbrain, and cement gland

Ventral view of the posterior portion of a stage 27 embryo

Expression anterior to cloacal aperture

Transverse section through the anterior region.

Expression in heart and neural tube

Figures are Copyright © 2003 Springer-Verlag. The original publication is available at http://link.springer-ny.com/link/service/journals/00427/contents/02/00276/. These images are also available on Xenbase.

 

By analyzing the DNA sequence of Tbx20 I then demonstrated that it is very closely related to Tbx20 genes in organisms ranging from chickens, frogs, and fish to mice and humans. This information further suggested that Tbx20 is likely involved in controlling the creation of a heart not only in frogs but also in all vertebrates, including humans. I then spent some time working the collected data into a manuscript, which has since been published in the journal Development, Genes and Evolution. I am now using various techniques to perturb the normal expression of Tbx20 in the frog to begin to elucidate the role this gene may be playing in the development of this most vital of organs.

I have further gone on to investigate the cellular and molecular relationship between two T-box genes, Tbx5 and Tbx20. I have demonstrated that blocking Tbx5 or Tbx20 gives phenotypes that display a high degree of similarity as judged by overall gross morphology, molecular marker analysis, and cardiac physiology, implying that the two genes are required for and have non-redundant functions in early heart development. In addition, I have demonstrated that although coexpressed, Tbx5 and Tbx20 are not dependent on one another's expression, but rather have a synergistic role during early heart development. Consistent with this proposal, I have shown that TBX5 and TBX20 can physically interact, mapped the interaction domains, shown a cellular interaction for the two proteins in cardiac development and therefore, provided the first evidence for direct interaction between members of the T-box gene family.

Cardiac differentiation still occurs in TBX5 and TBX20 morphants. Whole-mount in situ with ANF and cardiac troponin.
Figures are © The Company of Biologists Ltd 2005. The original publication can be accessed at Development 132, 553-563 (2005)

Tbx5 and Tbx20 synergistically act to regulate cardiac gene expression. (A-L) Embryos injected with the indicated morpholinos at the one-cell stage. (A-D) Nkx2-5 whole mount in situ hybridization. (E-H) XANF whole mount in situ hybridization. (I-L) XTnIc whole mount in situ hybridization. (A, E, I) ControlMO, (B, F, J) TBX5MO injected at suboptimal dose, (C, G, K) TBX20MO injected at suboptimal dose, (D, H, L) TBX5MO and TBX20MO injected in combination at suboptimal doses. All embryo were cleared to reveal heart expression. (M) Statistics for embryos injected with suboptimal doses of TBX5MO and TBX20MO in combination with each other or with ControlMO. Hearts were judged as having defects if they displayed a pericardial edema, an unlooped heart tube, or reduction in cardiac mass.
Figures are © The Company of Biologists Ltd 2005. The original publication can be accessed at Development 132, 553-563 (2005)

Publications

Brown D. D., Binder O., Pagratis M., Parr B.A., Conlon F.L. Developmental expression of the Xenopus laevis Tbx20 orthologue. Dev Genes Evol. 2003 Jan; 212(12): 604-7. (PDF version)

Brown, D. D., Martz, S. N., Binder, O., Goetz, S. C., Price, B. M. J., Smith, J. C. and Conlon, F. L. (2005). Tbx5 and Tbx20 act synergistically to control vertebrate heart morphogenesis. Development 132, 553-563. (PDF version - Recommended read by Faculty of 1000 Biology)

Brown, D.D., Davis, A.C., Conlon, F.L., (2005) Xtn3 is a developmentally expressed cardiac and skeletal muscle-specific novex-3 titin isoform. Gene Expression Patterns (in press) (PDF)

Goetz, S.C., Brown, D.D., Conlon, F.L., (2006) TBX5 is required for embryonic cardiac cell cycle progression. Development 133: 2575-2584. (PDF)

Feduccia, A. and Nowicki, J. (2002). The hand of birds revealed by early ostrich embryos. Naturwissenschaften 89, 391-3. (I took a picture for the article which was used as the cover for the journal)

Honors/Awards

UNC Lineberger Graduate Fellow Award, 2006
UNC Graduate School Dissertation Completion Fellowship, 2006-present
National Science Foundation Graduate Research Fellowship, 2002-2005
Best Presentation, UNC Genetics/Duke Cell Biology Retreat, Wilmington, NC, 2004
Best Student Presentation Award, UNC Cellular and Molecular Biology (CMB) Annual Retreat, 2003
Spessard Award in Biology (Highest Biology Honor), Hendrix College, 2000
Chairman's Scholarship (Academic Scholarship), Hendrix College, 1996-2000

Conferences

"The Requirement for Tbx20 in Vertebrate Heart Morphogenesis". UNC Cellular and Molecular Biology (CMB) Annual Retreat, 4-28-2003

"Tbx5 and Tbx20 act synergistically to control vertebrate heart morphogenesis". UNC Genetics/Duke Cell Biology Retreat, Wilmington, NC, 9-17-2004

"Tbx5 and Tbx20 act synergistically to control vertebrate heart morphogenesis". 13th International Conference of the International Society of Differentiation (ISD), Honolulu, Hawaii, USA, 9-5-2004

"Estimated Kernel Home Ranges, Seasonal Movements, and Habitat Uses of the Timber Rattlesnake". National Conference for Undergraduate Research (NCUR) in Missoula, Montana, April 27, 2000 and at the Arkansas Academy of Sciences, Little Rock, Arkansas April 7-8, 2000

Education

Doctorate of Philosophy, Biology, Expected December 2006
University of North Carolina at Chapel Hill, Chapel Hill, NC
Dissertation: Characterization of the role of Tbx20 in vertebrate heart development
Graduate Advisor: Dr. Frank L. Conlon

Bachelor of Arts, Biology; May 2000
Distinction in Biology
Hendrix College, Conway, AR

Positions

Pre-Doctoral Fellow/Ph.D. Research, Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC,
August 2001 - present

Research Technologist, Division of Toxicology, University of Arkansas for Medical Sciences (UAMS), Little Rock, AR
April 2000 - June 2001
-Studied the role of gamma-aminobutyric acid receptor type A (GABAA-R) subunits in the rat kidney.

Field Researcher, Department of Biological Sciences, University of Arkansas, Fayetteville, AR
June 1999 - September 1999
-Tracked the seasonal movement patterns and habitat uses of the Timber Rattlesnake (Crotalus horridus horridus) using radio-telemetry

Research Technician, Department of Physiology, University of Arkansas for Medical Sciences (UAMS), Little Rock, AR
June 1998 - September 1998
-Studied the rates of influx and efflux through the Na+/K+ pump and the K+/Cl- co-transporter of rabbit erythrocytes using Rubidium-86.

Teaching Experience

Laboratory Assistant, Department of Biology, Hendrix College, Conway, AR
September 1998 - May 2000
-Assisted undergraduates in General Zoology, General Physiology, and General Ecology labs

Teaching Assistant, Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC,
January 2002 - May 2002
-Held recitations twice a week and hosted exam review sessions for Cell and Developmental Biology course



 

Random stuff I've done while goofing off in the lab (a.k.a. downtime)


My first ever Flash animation (done 5 years ago). Pretty bad.

 

Click here for a movie of a beating heart in a Xenopus laevis tadpole. (AVI format - 1.3 Mb) - right click to download movie

Click here for another movie of a beating heart in a Xenopus laevis tadpole. (AVI format - 1.4 Mb) - right click to download movie

Click here for a cool movie of blood flow in Xenopus laevis gills. (AVI format - 6.0 Mb) - right click to download movie

This is a time-lapse movie I filmed for fun. It's a Xenopus laevis embryo undergoing the early stages of cleavage.

Fertilized Xenopus laevis embryos after the first cleavage.

 

Xenopus laevis embryos after 5-6 cell divisions.

 

Xenopus laevis embryos at about stage 8.

 

Neurula stage Xenopus laevis embryos

 

Xenopus laevis tadpole.

 

Just a picture I took of Xenopus laevis tadpole melanocytes.

 

 

 

The Frank Conlon Lab

Department of Genetics / Department of Biology - University of North Carolina - Chapel Hill

 

Web maintained by Daniel Brown (ddbrown@email.unc.edu)