Ganko EW, Meyers BC, Vision TJ. 2007. Divergence in expression between duplicated genes in Arabidopsis. Mol. Biol. Evol. 24(10):2298-2309. [Advance Access published August 1, 2007.]
Pubmed / Journal Website (open access)

Ganko EW, Greene CS, Lewis JA, Bhattacharjee V, McDonald JF. LTR retrotransposon-gene associations in Drosophila melanogaster. J Mol Evol. 2006 Jan;62(1):111-20. Epub 2006 Jan 11.
Pubmed | Journal Website

DeBarry JD, Ganko EW, McCarthy EM, McDonald JF. The contribution of LTR retrotransposon sequences to gene evolution in Mus musculus.
Mol Biol Evol. 2006 Mar;23(3):479-81. [Epub 2005 Dec 20]
Pubmed | Journal Website

Franchini LF, Ganko EW, McDonald JF. 2004. Retrotransposon-gene associations are wide-spread among D.melanogaster populations. Mol. Biol. Evol., Jul;21(7):1323-31.
PubMed / Journal Website

Gao L, McCarthy EM, Ganko EW, McDonald JF. 2004. Evolutionary history of Oryza sativa LTR retrotransposons: a preliminary survey of the rice genome sequences. BMC Genomics, 5:18.
PubMed / Journal Website

Ganko EW, Bhattacharjee V, Schliekelman P, and McDonald JF. 2003. Evidence for the contribution of LTR retrotransposons to C.elegans gene evolution. Mol. Biol. Evol., 20(11):1925-1931.
PubMed / Journal Website

McCollum A, Ganko EW, Barrass P, Rodriguez J, McDonald JF. 2002. Evidence for the adaptive significance of an LTR retrotransposon sequence in a Drosophila heterochromatic gene. BMC Evolutionary Biology 2 No. 5: 1-7.
PubMed / Journal website

Ganko E, Fielman KT, McDonald JF. 2001. Evolutionary history of Cer elements and their impact on the C.elegans genome. Genome Research 11: 2066-2074.
PubMed / Journal website

Pyankov VI, Voznesenskaya EV, Kuz'min AN, Ku MSB, Ganko E, Franceschi VR, Black CC, Edwards GE. 2000. Occurrence of C3 and C4 photosynthesis in cotyledons and leaves of Salsola species (Chenopodiaceae). Photosynthesis Research, 63:69-84.
PubMed