Publications

  1. O.Shats, I.I.Vaisman, A.Shats, S.Sherman

    2. Sequence-conformation-structure database for amino acid residues in protein structures.
    Bioinformatics,  1999, 15, 6, 525-526. [Medline]
  2. I.I.Vaisman, A.Tropsha, W.Zheng

    3. Compositional Preferences in Quadruplets of Nearest Neighbor Residues in Protein Structures: Statistical Geometry Analysis.
    In: Proceedings of the IEEE Symposia on Intelligence and Systems, 1998, p.163-168.
    [Computer Society Digital Library PDF - subscription required]  [Preprint - PDF]
  3. W.Zheng, S.J.Cho, I.I.Vaisman, A.Tropsha

    4. A New Approach to Protein Fold Recognition Based on Delaunay Tessellation of Protein Structure.
    In: Pacific Symposium on Biocomputing'97, Altman R.B. et al., Eds,
    World Scientific, Singapore, 1997, p.487-496  [Medline]
  4. R.K.Singh, A.Tropsha, I.I.Vaisman

    5. Delaunay Tessellation of Proteins: Four Body Nearest Neighbor Propensities of Amino Acid Residues.
    J. Comput. Biol. 1996, 3, 2, 213-221.  [Medline] [Preprint - PDF]
  5. Vaisman I.I.

    6. Virtual communities at interdisciplinary boundaries
    In: Biocomputing, Hunter L. and Klein T.E., Eds,
    World Scientific, Singapore, 1995, p.756-757.
  6. A.Tropsha, R.K.Singh, I.I.Vaisman and W.Zheng

    7. Statistical geometry analysis of proteins: Implications for inverted structure prediction
    In: Biocomputing, Hunter L. and Klein T.E., Eds,
    World Scientific, Singapore, 1995, p.614-623.  [Medline]
  7. D.Hoffman, S.Laiter, R.K.Singh, I.I.Vaisman, A.Tropsha

    8. Rapid protein structure classification using one-dimensional structure profiles on the BioSCAN parallel computer.
    Comput. Applic. Biosci. 1995, 11, 6, 675-680. [Medline]
  8. S.Laiter, D.Hoffman, R.K.Singh, I.I.Vaisman, A.Tropsha

    9. Pseudotorsional OCCO bacbone angle as a single descriptor of protein secondary structure.
    Protein Science, 1995, 4, 8, 1633-1643. [Medline]
  9. I.I.Vaisman, F.K.Brown, A.Tropsha

    10. Distance Dependence of Water Structure Around Model Solutes.
    J. Phys. Chem., 1994, 98, 21, 5559-5564.
  10. Y.M.Kessler, Y.P.Puhovski, M.G.Kiselev, I.I.Vaisman

    11. Computer simulations of liquid systems: possibilities and principal results.
    In: Chemistry of Non-Aqueous Solutions. Recent Advances, eds. A.I.Popov, G.Mamantov.
    VCH Publishers, New York, 1994, pp.307-373. (Book chapter)
  11. I.I.Vaisman, L.Perera, M.L.Berkowitz

    12. Mobility of stretched water.
    J.Chem.Phys., 1993, 98, 12, 9859-9862
  12. Y.M.Kessler, I.I.Vaisman, M.G.Kiselev, Y.P.Puhovski

    13. Preferential solvation of ions in binary mixed solvents: NMR and simulation data.
    Acta Chim. Hung., 1992, 129, 6, 787-824 (Feature article).
  13. I.I.Vaisman, M.L.Berkowitz

    14. Local structural order and molecular associations in water-DMSO mixtures. Molecular dynamics study.
    J. Am. Chem. Soc., 1992, 114, 20, 7889-7896
  14. Y.P.Puhovski, M.G.Kiselev, I.I.Vaisman, Y.M.Kessler

    15. Structural and dynamic peculiarities of Na+ and Cl- hydration from results of MD experiment.
    In: Thermodynamics of Electrolyte Solutions, ed. G.A.Krestov. Ivanovo, 1992, pp.62-68.
  15. I.I.Vaisman, M.G.Kiselev, Y.P.Puhovski, Y.M.Kessler

    16. The Na+ ion solvation in water- hexamethylphosphorictriamide mixture: Molecular dynamics simulation.
    In: Modelling of Molecular Structures and Properties, ed. J.-L. Rivail ,
    Stud. Phys. Theor. Chem. v.71, Elsevier, Amsterdam, 1990, pp.187-194.
  16. Y.M.Kessler, A.N.Petrov, I.I.Vaisman, V.V.Goncharov, G.A.Alper

    17. The influence of cations on the hydration shell of hexamethylphosphoramide.
    Russ. J. Phys. Chem., 1990, 64, 2, 247-252.
  17. Y.M.Kessler, R.S.Kumeev, I.I.Vaisman, R.B.Lyalina, R.H.Bratishko

    18. Ionic mobilities at infinite dilution: Structural aspects.
    Ber. Bunsenges. Phys. Chem., 1989, 93, 7, 770-782.
  18. M.G.Kiselev, I.I.Vaisman, Y.P.Puhovski, Y.M.Kessler

    19. Thermodynamic properties of the water-HMPT system from molecular dynamics data.
    In: Thermodynamics of Nonelectrolyte Solutions, ed. G.A.Krestov. Ivanovo, 1989, pp.79-84.
    (Chem. Abstr. 112:126600v).
  19. I.I.Vaisman, R.B.Lyalina, Y.M.Kessler, R.S.Kumeev, V.V.Goncharov

    20. Effect of solvent structure on the mobility of ions at infinite dilution.
    Russ. J. Phys. Chem., 1988, 62, 3, 838-840.
  20. M.G.Kiselev, B.G.Abrosimov, I.I.Vaisman, Y.M.Kessler

    21. Error estimation in molecular dynamics experiments with a tabulated intermolecular interaction potential.
    Mol. Simulation, 1988, 1, 5, 321-326.
  21. N.A.Abakumova, I.I.Shamonov, Y.M.Kessler, I.I.Vaisman

    22. Fusibility diagrams of binary systems of water with HMPT, DMF, DEP, DMA, acetone, and THF.
    In: Modern Problems in Physical Chemistry of Solutions. Leningrad, 1981, v.2, pp.47-54.
    (Chem. Abstr. 98:78941a).
  22. 14. Y.M.Kessler, N.A.Abakumova, I.I.Vaisman

    23. The fusion diagrams for the water-dimethylform-amide and water-diethylformamide systems.
    Russ. J. Phys. Chem., 1981, 55, 10, 2682-2684.

Created in July, 1994.  Last update: October, 1999. 
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