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iFoldAnalysis
The iFoldAnalysis software is used for post-simulation biophysical analyses of iFold trajectories. Please download it from here:
iFoldAnalysis.
Xmgr on OS X (Intel)
ACE/gr is a 2D plotting tool for X Window System. It uses an OSF Motif-based user interface, and is popularly known as Xmgr. My physicist
colleagues believe that the good old
Xmgr has a much more poweful graphical user-interface than its successor,
Grace. To install
Xmgr on OS-X use this package:
xmgr-4.1.2-IntelOSX.tar.gz
Steps to follow:
First install
DarwinPorts. The disk-image installer file for the latest DarwinPorts package can be downloaded from
here.
- Once DarwinPorts is installed, update the port:
$ sudo su
# port -d selfupdate
- Next install automake autoconf X.org and OpenMotif:
# port install automake
# port instsll autoconf
# port instsll xorg
# port instsll openmotif
- Installing OpenMotif will install dependency packages which takes quite a while. Next, download the xmgr package:
# cd /tmp
# wget http://www.unc.edu/~shantanu/download/xmgr-4.1.2-IntelOSX.tar.gz
# tar -zxvf xmgr-4.1.2-IntelOSX.tar.gz
- Next, configure the xmgr with DarwinPorts based library and config paths, and compile the sources:
# cd xmgr-4.1.2-IntelOSX
# ./configure --enable-extra-incpath=/opt/local/include/ --enable-extra-ldpath=/opt/local/lib/
# make
- Finally copy the freshly built xmgr binary to, say, /opt/local/bin, cleanup and exit!
# cp src/xmgr /opt/local/bin/
# cd /tmp; rm -rf xmgr-*
# exit
You may test your Xmgr installation using open-x11:
$ open-x11 xmgr
If everything went well - Hurray you have xmgr! :-)
TetraDA - Delaunay Analysis of Protein Structure